Tutorial - Revision history

RobertKenward: /* Kaplan Meier Survival Analysis */

2014-12-11T19:06:35Z

Kaplan Meier Survival Analysis

← Older revision		Revision as of 19:06, 11 December 2014
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	* Under '''Analysis Options''' ensure ''one set'' is selected		* Under '''Analysis Options''' ensure ''one set'' is selected

	* Under '''Input files''' press '''browse''' and find, for the ''set 1 survival file'' the file ''<RangesFolder>\samples\goshawk\~~GoshawkJuvMale~~.srv''.		* Under '''Input files''' press '''browse''' and find, for the ''set 1 survival file'' the file ''<RangesFolder>\samples\goshawk\Juv_Male.srv''.

	* Press the '''Run Analysis''' button.		* Press the '''Run Analysis''' button.
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	* Under '''Analysis Options''' select ''two sets for comparison''		* Under '''Analysis Options''' select ''two sets for comparison''

	* Under '''Input files''' check that the ''set 1 survival file'' is still ''<RangesFolder>\samples\goshawk\~~GoshawkJuvMale~~.srv''.		* Under '''Input files''' check that the ''set 1 survival file'' is still ''<RangesFolder>\samples\goshawk\Juv_Male.srv''.

	* Check that '''set 1 start date''' has ''specified date'' selected, of 1 July 1980.		* Check that '''set 1 start date''' has ''specified date'' selected, of 1 July 1980.
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	* Check that '''set 1 end date''' has ''specified date'' selected, of 31 March 1981.		* Check that '''set 1 end date''' has ''specified date'' selected, of 31 March 1981.

	* Press '''browse''' for the ''set 2 survival file'' and find ''<RangesFolder>\samples\goshawk\~~GoshawkJuvFem~~.srv''.		* Press '''browse''' for the ''set 2 survival file'' and find ''<RangesFolder>\samples\goshawk\Juv_Female.srv''.

	* For the '''set 2 start date''', use the ''set 1 start date'' option.		* For the '''set 2 start date''', use the ''set 1 start date'' option.

Admin: /* Modelling */

2014-12-11T18:56:47Z

Modelling

Admin: /* Modelling */

2014-12-11T18:54:34Z

Modelling

← Older revision		Revision as of 18:54, 11 December 2014
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	==== Plotting observed data only ====		==== Plotting observed data only ====

	[[File:Modelling analysis1.png\|thumb\|right\|upright=1.6\|Plotting observed data only .]]		[[File:Modelling analysis1.png\|thumb\|right\|upright=1.6\|Plotting observed data only.]]

	* Click on the '''Modelling''' button to open the setup window.<br />		* Click on the '''Modelling''' button to open the setup window.<br />
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	==== Comparing observed and random data ====		==== Comparing observed and random data ====

	[[File:~~To be added~~]]		[[File:Modelling analysis2.png\|thumb\|right\|upright=1.6\|Comparing observed and random data.]]

	* Click on the '''Modelling''' button to open the setup window.<br />		* Click on the '''Modelling''' button to open the setup window.<br />
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	==== Plotting survival for a single data set ====		==== Plotting survival for a single data set ====

	[[File:~~To be added~~]]		[[File:Modelling analysis3.png\|thumb\|right\|upright=1.6\|Plotting survival for a single data set.]]

	* Click on the '''Modelling''' button to open the setup window.<br />		* Click on the '''Modelling''' button to open the setup window.<br />
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	==== Comparing two sets of survival data ====		==== Comparing two sets of survival data ====

	[[File:~~To be added~~]]		[[File:Modelling analysis4.png\|thumb\|right\|upright=1.6\|Comparing two sets of survival data .]]

	* Under '''Analysis Options''' select ''two sets for comparison''		* Under '''Analysis Options''' select ''two sets for comparison''

Admin: /* Plotting observed data only */

2014-12-11T18:53:32Z

Plotting observed data only

← Older revision		Revision as of 18:53, 11 December 2014
Line 438:		Line 438:
	==== Plotting observed data only ====		==== Plotting observed data only ====

	[[File:~~To be added~~]]		[[File:Modelling analysis1.png\|thumb\|right\|upright=1.6\|Plotting observed data only .]]

	* Click on the '''Modelling''' button to open the setup window.<br />		* Click on the '''Modelling''' button to open the setup window.<br />
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	The computer does 15 habitat analyses and displays the results in a graph of the log proportion of resource on the log area of the range. As the first resource is the area of island ''inclusive of woodland'' (and thus unlike the exclusive habitat areas in most habitat analysis), it fills the range of most of the 15 squirrels, but six of them also included appreciable proportions of oil-extraction area which is not included as usable island; as these squirrels also had the larger range outlines there is a negative correlation (''r'' = -0.579), which repeats in the statistics window. If you click ''WOODL'' at the top left of the main window, the graph shows a stronger relationship (''r'' = -0.863) with steeper green regression line. The prediction of minimum woodland area required, from the intercept ''c'', is 10^-1 and therefore about 0.1 ha.		The computer does 15 habitat analyses and displays the results in a graph of the log proportion of resource on the log area of the range. As the first resource is the area of island ''inclusive of woodland'' (and thus unlike the exclusive habitat areas in most habitat analysis), it fills the range of most of the 15 squirrels, but six of them also included appreciable proportions of oil-extraction area which is not included as usable island; as these squirrels also had the larger range outlines there is a negative correlation (''r'' = -0.579), which repeats in the statistics window. If you click ''WOODL'' at the top left of the main window, the graph shows a stronger relationship (''r'' = -0.863) with steeper green regression line. The prediction of minimum woodland area required, from the intercept ''c'', is 10^-1 and therefore about 0.1 ha.


	==== Comparing observed and random data ====		==== Comparing observed and random data ====

Admin: /* Clipping home ranges by a river outline */

2014-12-11T18:28:50Z

Clipping home ranges by a river outline

← Older revision		Revision as of 18:28, 11 December 2014
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	The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).		The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).

			<p> </p>
	<p> </p>		<p> </p>
	<p> </p>		<p> </p>

Admin: /* Clipping home ranges by a river outline */

2014-12-11T18:28:27Z

Clipping home ranges by a river outline

← Older revision		Revision as of 18:28, 11 December 2014
Line 423:		Line 423:
	The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).		The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).

	~~<p> </p>~~
	<p> </p>		<p> </p>
	<p> </p>		<p> </p>

Admin: /* Fish analyses, midline and clipping */

2014-12-11T18:28:11Z

Fish analyses, midline and clipping

← Older revision		Revision as of 18:28, 11 December 2014
Line 423:		Line 423:
	The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).		The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).

			<p> </p>
			<p> </p>
	<p> </p>		<p> </p>
	<p> </p>		<p> </p>

Admin: /* Fish analyses, midline and clipping */

2014-12-11T18:27:37Z

Fish analyses, midline and clipping

← Older revision		Revision as of 18:27, 11 December 2014
Line 423:		Line 423:
	The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).		The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).

			<p> </p>
			<p> </p>
			<p> </p>
			<p> </p>
	~~ ~~
	~~ ~~
	~~ ~~

	== Modelling ==		== Modelling ==

Admin: /* Fish analyses, midline and clipping */

2014-12-11T18:24:31Z

Fish analyses, midline and clipping

← Older revision		Revision as of 18:24, 11 December 2014
Line 422:		Line 422:

	The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).		The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).









	== Modelling ==		== Modelling ==

Admin: /* Fish analyses, midline and clipping */

2014-12-11T18:23:47Z

Fish analyses, midline and clipping

← Older revision		Revision as of 18:23, 11 December 2014
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	* Press the '''Run Analysis''' button.		* Press the '''Run Analysis''' button.

	The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).		The clip file be loaded in the main window. You can load the original file ''fish_x.edg'' as a background to see the difference between them. The statistics will show the total area of the MCP, then the percentage of that area that is in the main river (dark blue) and tributary (light blue).


	== Modelling ==		== Modelling ==

← Older revision		Revision as of 18:56, 11 December 2014
Line 438:		Line 438:
	==== Plotting observed data only ====		==== Plotting observed data only ====

	[[File:~~Modelling analysis1~~.png\|thumb\|right\|upright=1.6\|Plotting observed data only.]]		[[File:Modelling_analysis1.png\|thumb\|right\|upright=1.6\|Plotting observed data only.]]

	* Click on the '''Modelling''' button to open the setup window.<br />		* Click on the '''Modelling''' button to open the setup window.<br />
Line 457:		Line 457:
	==== Comparing observed and random data ====		==== Comparing observed and random data ====

	[[File:~~Modelling analysis2~~.png\|thumb\|right\|upright=1.6\|Comparing observed and random data.]]		[[File:Modelling_analysis2.png\|thumb\|right\|upright=1.6\|Comparing observed and random data.]]

	* Click on the '''Modelling''' button to open the setup window.<br />		* Click on the '''Modelling''' button to open the setup window.<br />
Line 479:		Line 479:
	==== Plotting survival for a single data set ====		==== Plotting survival for a single data set ====

	[[File:~~Modelling analysis3~~.png\|thumb\|right\|upright=1.6\|Plotting survival for a single data set.]]		[[File:Modelling_analysis3.png\|thumb\|right\|upright=1.6\|Plotting survival for a single data set.]]

	* Click on the '''Modelling''' button to open the setup window.<br />		* Click on the '''Modelling''' button to open the setup window.<br />
Line 495:		Line 495:
	==== Comparing two sets of survival data ====		==== Comparing two sets of survival data ====

	[[File:~~Modelling analysis4~~.png\|thumb\|right\|upright=1.6\|Comparing two sets of survival data .]]		[[File:Modelling_analysis4.png\|thumb\|right\|upright=1.6\|Comparing two sets of survival data .]]

	* Under '''Analysis Options''' select ''two sets for comparison''		* Under '''Analysis Options''' select ''two sets for comparison''